Eurojust’s Presidency comprises its President and two Vice-Presidents, who are assisted in the performance of their specific duties by the administrative staff of Eurojust. Elected from among the National Members, the President represents the Agency, oversees meetings and directs and monitors Eurojust’s activities and management. The Vice-Presidents carry out duties entrusted to them by the President and represent the President if he or she is prevented from carrying out his or her duties.

In November 2024, the College elected Michael Schmid, National Member for Austria, as its President.

The National Member for Slovenia, Boštjan Škrlec, was elected Vice-President in December 2020.

In June 2022, Margarita Šniutytė-Daugėlienė, National Member for Lithuania, was elected Vice-President.